Out of the Water: Origin and Diversification of the LBD Gene Family

April 10th, 2015

Out of the Water: Origin and Diversification of the LBD Gene Family. 2015. Chanderbali, A. S., F. He, P. S. Soltis, D. E. Soltis. Molecular Biology and Evolution. Accepted manuscript available.

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Optical Sectioning and 3D Reconstructions as an Alternative to Scanning Electron Microscopy for Analysis of Cell Shape

April 10th, 2015
Landis, J. B., K. L. Ventura, D. E. Soltis, P. S. Soltis, and D. G. Oppenheimer. 2015. Optical Sectioning and 3D Reconstructions as an Alternative to Scanning Electron Microscopy for Analysis of Cell Shape. Applications in Plant Sciences 3:1400112. [View article at publisher’s site]

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MarkerMiner 1.0: A New Application for Phylogenetic Marker Development Using Angiosperm Transcriptomes

April 10th, 2015
Chamala, S., N. García, G. T. Godden, V. Krishnakumar, I. E. Jordon-Thaden, R. D. Smet, W. B. Barbazuk, D. E. Soltis, and P. S. Soltis. 2015. MarkerMiner 1.0: A New Application for Phylogenetic Marker Development Using Angiosperm Transcriptomes. Applications in Plant Sciences 3:1400115. [View article on publisher’s site]

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Multiple origins and chromosomal novelty in the allotetraploid Tragopogon castellanus (Asteraceae)

January 9th, 2015
Mavrodiev, E. V., M. Chester, V. N. Suárez-Santiago, C. J. Visger, R. Rodriguez, A. Susanna, R. M. Baldini, P. S. Soltis, and D. E. Soltis. 2015. Multiple origins and chromosomal novelty in the allotetraploid Tragopogon castellanus (Asteraceae). New Phytol doi: 10.1111/nph.13227 [Link to article on publicher’s site]

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Phylogeny, divergence times, and historical biogeography of the angiosperm family Saxifragaceae

January 9th, 2015
Deng, J., B. T. Drew, E. V. Mavrodiev, M. A. Gitzendanner, P. S. Soltis, and D. E. Soltis. 2015. Phylogeny, divergence times, and historical biogeography of the angiosperm family Saxifragaceae. Molecular Phylogenetics and Evolution 83:86–98. [Link to article on publisher’s site]

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Phylotranscriptomic analysis of the origin and early diversification of land plants

December 12th, 2014
Wickett, N. J., S. Mirarab, N. Nguyen, T. Warnow, E. Carpenter, N. Matasci, S. Ayyampalayam, M. S. Barker, J. G. Burleigh, M. A. Gitzendanner, B. R. Ruhfel, E. Wafula, J. P. Der, S. W. Graham, S. Mathews, M. Melkonian, D. E. Soltis, P. S. Soltis, N. W. Miles, C. J. Rothfels, L. Pokorny, A. J. Shaw, L. DeGironimo, D. W. Stevenson, B. Surek, J. C. Villarreal, B. Roure, H. Philippe, C. W. dePamphilis, T. Chen, M. K. Deyholos, R. S. Baucom, T. M. Kutchan, M. M. Augustin, J. Wang, Y. Zhang, Z. Tian, Z. Yan, X. Wu, X. Sun, G. K.-S. Wong, and J. Leebens-Mack. 2014. Phylotranscriptomic analysis of the origin and early diversification of land plants. PNAS 111:E4859–E4868. [Link to article on publisher’s site]

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Data access for the 1,000 Plants (1KP) project

December 12th, 2014
Matasci, N., L.-H. Hung, Z. Yan, E. J. Carpenter, N. J. Wickett, S. Mirarab, N. Nguyen, T. Warnow, S. Ayyampalayam, M. Barker, J. G. Burleigh, M. A. Gitzendanner, E. Wafula, J. P. Der, C. W. dePamphilis, B. Roure, H. Philippe, B. R. Ruhfel, N. W. Miles, S. W. Graham, S. Mathews, B. Surek, M. Melkonian, D. E. Soltis, P. S. Soltis, C. Rothfels, L. Pokorny, J. A. Shaw, L. DeGironimo, D. W. Stevenson, J. C. Villarreal, T. Chen, T. M. Kutchan, M. Rolf, R. S. Baucom, M. K. Deyholos, R. Samudrala, Z. Tian, X. Wu, X. Sun, Y. Zhang, J. Wang, J. Leebens-Mack, and G. K.-S. Wong. 2014. Data access for the 1,000 Plants (1KP) project. GigaScience 3:17. [Link to article on publisher’s site]

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Between Two Fern Genomes

December 12th, 2014
Sessa, E. B., J. A. Banks, M. S. Barker, J. P. Der, A. M. Duffy, S. W. Graham, M. Hasebe, J. Langdale, F.-W. Li, D. B. Marchant, K. M. Pryer, C. J. Rothfels, S. J. Roux, M. L. Salmi, E. M. Sigel, D. E. Soltis, P. S. Soltis, D. W. Stevenson, and P. G. Wolf. 2014. Between Two Fern Genomes. GigaScience 3:15. [Link to article on publisher’s site]

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Patterns of chromosomal variation in natural populations of the neoallotetraploid Tragopogon mirus (Asteraceae)

December 12th, 2014

Chester, M., R. K. Riley, P. S. Soltis, and D. E. Soltis. 2014. Patterns of chromosomal variation in natural populations of the neoallotetraploid Tragopogon mirus (Asteraceae). Heredity, doi: 10.1038/hdy.2014.101. [Link to article on publisher’s site] (more…)

Nonadditive Gene Expression In Polyploids

October 9th, 2014

Yoo, M.-J., X. Liu, J. C. Pires, P. S. Soltis, and D. E. Soltis. 2014. Nonadditive Gene Expression In Polyploids. Annual Review of Genetics 48: In Press [Link to article on publisher’s site]

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