February 28th, 2014
By Gitzendanner, Matt

The Soltis Lab

Scientists and students in the Soltis Lab are currently working with a variety of technologies to investigate mechanisms of speciation, evolutionary relationships and character evolution in flowering and land plants at all taxonomic levels. Current projects include the study of higher level phylogenetic relationships and character evolution in the angiosperms, floral evolution, the genetic and genomic consequences of polyploidy, conservation genetics of rare plants, phylogeography, and biogeography. Please explore our website for more information on our research.
Soltis_lab

The fate of polyploid lineages: A response to Mayrose et al. (2014)

July 29th, 2015
By Gitzendanner, Matt

Douglas E. Soltis, María Claudia Segovia-Salcedo, Ingrid Jordon-Thaden, Lucas C. Majure, Nicolas M. Miles, Evgeny V. Mavrodiev, Wenbin Mei, Mark E. Mort, Pamela S. Soltis, Graham R. Jones, Thomas Marcussen, Bengt Oxelman, and Matthew A. Gitzendanner. The fate of polyploid lineages: A response to Mayrose et al. (2014). Online at: http://www.flmnh.ufl.edu/museum-voices/soltis-lab/2015/07/29/the-fate-of-po…ose-et-al-2014/

Mayrose et al. (2011) and Arrigo and Barker (2012) concluded that neopolyploid lineages diversify more slowly than the diploid lineages from which they arise. We expressed concerns about this statement in Soltis et al. (2014a) to which Mayrose et al. (2014) responded. This article continues the discussion. We demonstrate a statistical problem with the original analysis which has not been discussed before. We point out that restricting to cpDNA data does not resolve the reticulation issue, contrary to Mayrose et al. (2014). Furthermore, we discuss some clade-specific problems with the data set used in the original analysis.

Soltis et al. (2015): The fate of polyploid lineages: a response to Mayrose et al. 2014

Supplementary material

Lab Fun Run

June 19th, 2015
By Gitzendanner, Matt

This happened a few months ago, but just now getting around to posting the photo. This was from the after run breakfast party.

2015LabFunRun

Population genetic variation, geographic structure, and multiple origins of autopolyploidy in Galax urceolata

June 19th, 2015
By Gitzendanner, Matt

Servick, S., C. J. Visger, M. A. Gitzendanner, P. S. Soltis, and D. E. Soltis. 2015. Population genetic variation, geographic structure, and multiple origins of autopolyploidy in Galax urceolata. Am. J. Bot., doi: 10.3732/ajb.1400554. [View on publisher’s site]

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Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications

June 19th, 2015
By Gitzendanner, Matt

Tank, D. C., J. M. Eastman, M. W. Pennell, P. S. Soltis, D. E. Soltis, C. E. Hinchliff, J. W. Brown, E. B. Sessa, and L. J. Harmon. 2015. Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications. New Phytol 207:454–467. [View on Publisher’s site]

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Modified CTAB and TRIzol protocols improve RNA extraction from chemically complex Embryophyta

June 19th, 2015
By Gitzendanner, Matt

Jordon-Thaden, I. E., A. S. Chanderbali, M. A. Gitzendanner, and D. E. Soltis. 2015. Modified CTAB and TRIzol protocols improve RNA extraction from chemically complex Embryophyta. Appl Plant Sci 3. [View on publisher’s site]

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Repeated range expansions and inter-/postglacial recolonization routes of Sargentodoxa cuneata (Oliv.) Rehd. et Wils. (Lardizabalaceae) in subtropical China revealed by chloroplast phylogeography

June 19th, 2015
By Gitzendanner, Matt

Tian, S., S.-Q. Lei, W. Hu, L.-L. Deng, B. Li, Q.-L. Meng, D. E. Soltis, P. S. Soltis, D.-M. Fan, and Z.-Y. Zhang. 2015. Repeated range expansions and inter-/postglacial recolonization routes of Sargentodoxa cuneata (Oliv.) Rehd. et Wils. (Lardizabalaceae) in subtropical China revealed by chloroplast phylogeography. Molecular Phylogenetics and Evolution 85:238–246. [View on publisher’s site]

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Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing

June 19th, 2015
By Gitzendanner, Matt

Yang, Y., M. J. Moore, S. F. Brockington, D. E. Soltis, G. K.-S. Wong, E. J. Carpenter, Y. Zhang, L. Chen, Z. Yan, Y. Xie, R. F. Sage, S. Covshoff, J. M. Hibberd, M. N. Nelson, and S. A. Smith. 2015. Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing. Mol Biol Evol msv081. [View on publisher’s site]

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Jacob Landis wins the FLMNH poster competition!

April 10th, 2015
By Gitzendanner, Matt

jblandisCongratulations to Jacob Landis who won the FLMNH Student Research Exhibit Best Poster award or 2014-2015! Jacob’s poster reported on the development of outreach activities working with high school students to conduct plant systematics and forensics research experiences.

Out of the Water: Origin and Diversification of the LBD Gene Family

April 10th, 2015
By Gitzendanner, Matt

Out of the Water: Origin and Diversification of the LBD Gene Family. 2015. Chanderbali, A. S., F. He, P. S. Soltis, D. E. Soltis. Molecular Biology and Evolution. Accepted manuscript available.

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Optical Sectioning and 3D Reconstructions as an Alternative to Scanning Electron Microscopy for Analysis of Cell Shape

April 10th, 2015
By Gitzendanner, Matt

Landis, J. B., K. L. Ventura, D. E. Soltis, P. S. Soltis, and D. G. Oppenheimer. 2015. Optical Sectioning and 3D Reconstructions as an Alternative to Scanning Electron Microscopy for Analysis of Cell Shape. Applications in Plant Sciences 3:1400112. [View article at publisher’s site]

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